Open-source HH-suite 2.0 available with better performance and new functionality! Download here

HHpred - Homology detection & structure prediction by HMM-HMM comparison

Search with pancreatitis induced protein PIP49. Paste example sequence.
or upload a local file
Select input format

Select HMM databases
(hold Ctr to select several)
MSA Generation Method
 HHblits  Psiblast 
Score secondary structure
 yes  no  predicted vs predicted only 
Alignment mode
 local  global 
 (leave empty for automatic creation)
Send notification to (optional)
Please send feedback to: soeding AT