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HHpred - Homology detection & structure prediction by HMM-HMM comparison

Input

Paste protein sequence or multiple alignment
Search with pancreatitis induced protein PIP49. Paste example sequence.
or upload a local file
Select input format
 

Search Options

Select HMM databases
(hold Ctr to select several)
StandardProteomes
MSA Generation Method
 HHblits  Psiblast 
Max. MSA Generation iterations
Score secondary structure
 yes  no  predicted vs predicted only 
Alignment mode
 local  global 
Realign with MAC
 

More options Show

Job Options

Job-ID
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Please send feedback to: soeding AT lmb.uni-muenchen.de